AlphaMate - optimising selection and management of diversity

Led by Gregor Gorjanc

Summary

AlphaMate is a program for optimising selection, maintenance of diversity, and mate allocation in breeding programmes. A range of breeding programmes can be optimised with AlphaMate (animal, crop, tree, fish, ...). A short description is given in Gorjanc and Hickey (2018), while a detailed description is given in the manual.

https://github.com/AlphaGenes/AlphaMate

Manual

Gorjanc and Hickey (2018) AlphaMate: a program for optimizing selection, maintenance of diversity and mate allocation in breeding programs, Bioinformatics, 34(19), 3408–3411

https://doi.org/10.1093/bioinformatics/bty375